bionode's Repositories

bioflow

No description

⭐ 0 🌐 Public

biohacker

A nodeschool workshop that gives some usage examples of bionode for bioinformatics

⭐ 5 🌐 Public

bionode

Modular and universal bioinformatics

⭐ 314 🌐 Public

bionode-bbi

Fetcher for BBI files (bigWig and bigBed).

⭐ 5 🌐 Public

bionode-blast

NodeJS API wrapping the NCBI BLAST Common URL API. WIP.

⭐ 1 🌐 Public

bionode-bwa

A Node.js wrapper for the Burrow-Wheeler Aligner (BWA).

⭐ 8 🌐 Public

bionode-examples

Bionode usage example files

⭐ 6 🌐 Public

bionode-fasta

Streamable FASTA parser.

⭐ 14 🌐 Public

bionode-fastq

Streamable FASTQ parser

⭐ 2 🌐 Public

bionode-flow

No description

⭐ 0 🌐 Public

bionode-gff

GFF parser

⭐ 3 🌐 Public

bionode-go

Gene Ontology in Bionode (WIP)

⭐ 7 🌐 Public

bionode-ncbi

Node.js module for working with the NCBI API (aka e-utils).

⭐ 67 🌐 Public

bionode-obo

Streaming OBO 1.2 Parser

⭐ 3 🌐 Public

bionode-quickgo

Acess EBI QuickGO REST API with promises and streams.

⭐ 1 🌐 Public

bionode-sam

Node.js wrapper for samtools.

⭐ 5 🌐 Public

bionode-scripts

Random useful scripts

⭐ 0 🌐 Public

bionode-seq

Module for DNA, RNA and protein sequences manipulation

⭐ 10 🌐 Public

bionode-sge

No description

⭐ 1 🌐 Public

bionode-sra

Node.js wrapper for SRA Toolkit

⭐ 6 🌐 Public

bionode-template

A base template for quickly creating bionode modules.

⭐ 8 🌐 Public

bionode-vcf

vcf parser using javascript

⭐ 5 🌐 Public

bionode-watermill

💧Bionode-Watermill: A (Not Yet Streaming) Workflow Engine

⭐ 37 🌐 Public

bionode-watermill-tutorial

This is a tutorial for bionode-watermill

⭐ 1 🌐 Public

bionode.io

Bionode website

⭐ 2 🌐 Public

biopkgs

Custom Nix packages not yet available on NixOS/nixpkgs

⭐ 1 🌐 Public

cocalc-docker

Docker setup for running CoCalc as downloadable software on your own computer

⭐ 0 🌐 Public

doc.bionode.io

Beautiful static documentation for your API

⭐ 0 🌐 Public

docker-browser-server

Spawn and expose docker containers over http and websockets

⭐ 0 🌐 Public

events

Gather together a group to skill-share, co-work, and create community

⭐ 0 🌐 Public

fasta-parser

Buffer Stream parser from FASTA to JSON.

⭐ 6 🌐 Public

get-bionode

A command line tutorial to learn bionode

⭐ 0 🌐 Public

github-project-public

Make GitHub project board visible to non members

⭐ 1 🌐 Public

gsoc16

GSoC Project: Streaming Workflow Engine

⭐ 5 🌐 Public

GSoC17

GSoC Project: Streaming Workflow Engine

⭐ 0 🌐 Public

gsoc18

No description

⭐ 0 🌐 Public

timeline

[project] gantt chart for msl

⭐ 1 🌐 Public

try-bionode

try bionode using docker

⭐ 1 🌐 Public